Sequence Similarity Clusters for the Entities in PDB 5HYI

Entity #1 | Chains: A,B,C,D
Ig gamma-1 chain C region protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 18977
95 % 114 182 118 Flexibility: Low
Max RMSD: 10.4, Avg RMSD: 1.5
PDBFlex
90 % 74 109 261
70 % 124 199 123
50 % 129 210 131
40 % 129 210 149
30 % 138 229 135

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5U66 2 A IgG1 fc derived from CD4-fc fusion 9606
2 5JIH 1 A, B Ig gamma-1 chain C region Hinge-CH2-CH3, UNP Residues 108-329 9606
3 1L6X 1 A IMMUNOGLOBULIN GAMMA-1 HEAVY CHAIN CONSTANT REGION Fc Fragment, Residues 119-325 9606
4 4BSV 1 A HETERODIMERIC FC ANTIBODY AZYMETRIC VARIANT 2 IG GAMMA 1 FC DOMAIN, RESIDUES 106-330 9606
5 4BSV 2 B HETERODIMERIC FC ANTIBODY AZYMETRIC VARIANT 2 IG GAMMA 1 FC DOMAIN, RESIDUES 106-330 9606
6 6S5A 1 A, D Fc P329G LALA 9606
7 4W4O 1 A, B Ig gamma-1 chain C region UNP residues 107-330 9606
8 5VH5 1 A Infliximab Fc 10090
9 5JII 1 A, B Ig gamma-1 chain C region Hinge-CH2-CH3, UNP Residues 108-329 9606
10 5W38 1 A, B Immunoglobulin heavy constant gamma 3 Fc domain, UNP residues 155-377 9606
11 5W5N 1 A, B Immunoglobulin heavy constant gamma 4 Sigma2 Fc fragment, UNP residues 106-327 9606
12 5HYF 1 A Ig gamma-1 chain C region Knob protein UNP residues 104-330 9606
13 4C54 1 A, B IG GAMMA-4 CHAIN C REGION FC FRAGMENT, RESIDUES 114-327 9606
14 4W4N 1 A, B Ig gamma-1 chain C region UNP residues 107-329 9606
15 2VUO 1 A, B IG GAMMA CHAIN C REGION FC FRAGMENT, RESIDUES 229-447 9986
16 5W5M 1 A, B Immunoglobulin heavy constant gamma 4 Sigma1 Fc fragment, UNP residues 106-327 9606
17 5W5L 1 A, B Immunoglobulin gamma-1 heavy chain Sigma Fc fragment, UNP residues 227-449 9606
18 5DVL 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
19 5U52 1 A, B IGG1 FC unp residues 262-469 9606
20 5JIK 1 A, B Ig gamma-1 chain C region Hinge-CH2-CH3, UNP Residues 108-329 9606
21 4L4J 1 A, B Ig gamma-2 chain C region CH2, CH3 DOMAINS (UNP residues 106-326) 9606
22 6UGW 1 A PF-06438179/GP1111 Fc LotA_Fc 9606
23 4DZ8 1 A Ig gamma-1 chain C region unp residues 108-330 9606
24 4DZ8 2 B Ig gamma-1 chain C region unp residues 108-330 9606
25 4BM7 1 A, B IG GAMMA-1 CHAIN C REGION IMMUNOGLOBULIN GAMMA, FC, RESIDUES 101-329 9606
26 3AVE 1 A, B Ig gamma-1 chain C region Fc fragment 9606
27 4KU1 1 A, B Ig gamma-1 chain C region UNP residues 120-327 9606
28 5GSQ 1 A, B, C, D Ig gamma-1 chain C region UNP residues 106-330 9606
29 4J12 1 A human Fc fragment unp residues 137-345 9606
30 5HYE 1 A, C Ig gamma-1 chain C region Knob protein UNP residues 104-330 9606
31 5HVW 1 A Ig gamma-4 chain C region 9606
32 5DI8 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
33 5DI8 2 B Ig gamma-1 chain C region UNP residues 104-330 9606
34 6G1E 1 A Immunoglobulin heavy constant gamma 1,Immunoglobulin heavy constant gamma 3 9606
35 6G1E 2 B Immunoglobulin gamma-1 heavy chain 9606
36 5IW3 1 A Ig gamma-1 chain C region D379E, L381M 9606
37 4WI2 1 A, B Ig gamma-1 chain C region unp residues 120-327 9606
38 6UGY 1 A Remicade Fc LotC_Fc 9606
39 5M3V 1 A Ig gamma-1 chain C region,Ig gamma-3 chain C region 9606
40 5M3V 2 B Ig gamma-1 chain C region 9606
41 4WI7 1 A, B Ig gamma-1 chain C region 9606
42 5DJZ 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
43 5DJZ 2 B Ig gamma-1 chain C region UNP residues 104-330 9606
44 4HAF 1 A, B Ig gamma-2 chain C region CH2, CH3 DOMAINS 9606
45 4NQT 1 A Ig gamma-1 chain C region UNP residues 118-330 9606
46 6UGX 1 A, B PF-06438179/GP1111 Fc 9606
47 5VGP 1 A, B Human Fc fragment with G1F/G0F glycan 9606
48 5O4E 1 A Immunoglobulin gamma-1 heavy chain 9606
49 5O4E 2 B, D Immunoglobulin gamma-1 heavy chain 9606
50 5O4E 3 C Immunoglobulin gamma-1 heavy chain 9606
51 5DJ6 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
52 5DJ6 2 B Ig gamma-1 chain C region UNP residues 104-330 9606
53 4BSW 1 A HETERODIMERIC FC ANTIBODY AZYMETRIC VARIANT 2 IG GAMMA 1 FC DOMAIN, RESIDUES 106-330 9606
54 4BSW 2 B HETERODIMERIC FC ANTIBODY AZYMETRIC VARIANT 2 IG GAMMA 1 FC DOMAIN, RESIDUES 106-330 9606
55 2DTS 1 A, B Ig gamma-1 chain C region Fc Fragment 9606
56 3V7M 1 A Ig gamma-1 chain C region unp residues 119-327 9606
57 3SGJ 1 A, B human Fc fragment unp residues 106-330 9606
58 4Q74 1 A, B Ig gamma-1 chain C region UNP residues 108-329 9606
59 5NSG 1 A Putative uncharacterized protein DKFZp686C11235 9606
60 5VU0 1 A, B Immunoglobulin gamma-1 heavy chain Fc region (UNP residues 230-446) 9606
61 3D6G 1 A, B Ig gamma-1 chain C region Fc fragment 9606
62 5DJC 1 A, D Ig gamma-1 chain C region UNP residues 104-330 9606
63 5DJC 2 B, E Ig gamma-1 chain C region UNP residues 104-330 9606
64 6IFJ 1 A Immunoglobulin gamma-1 heavy chain 9606
65 6IFJ 2 B Immunoglobulin gamma-1 heavy chain 9606
66 5DJ0 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
67 5DJ0 2 B Ig gamma-1 chain C region UNP residues 104-330 9606
68 5DJY 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
69 5DJY 2 B Ig gamma-1 chain C region UNP residues 104-330 9606
70 4ZNC 2 D, E, F Ig gamma-3 chain C region UNP residues 168-377 9606
71 5DJX 1 A, D Ig gamma-1 chain C region UNP residues 104-330 9606
72 5DJX 2 B, E Ig gamma-1 chain C region UNP residues 104-330 9606
73 4C55 1 A, B IG GAMMA-4 CHAIN C REGION FC FRAGMENT, RESIDUES 110-327 9606
74 6EAQ 1 A, B Immunoglobulin gamma-1 heavy chain 9606
75 5V43 1 A, B Ig gamma-1 chain C region residues 104-329 9606
76 3AY4 1 A, B Ig gamma-1 chain C region Fc fragment 9606
77 3AGV 1 A, B Ig gamma-1 chain C region Fc fragment, residues 120-330 9606
78 4WI6 1 A, B Ig gamma-1 chain C region unp residues 120-327 9606
79 4WWI 2 D, E, F Ig gamma-3 chain C region UNP residues 168-377 9606
80 1OQO 1 A, B immunoglobulin gamma-1 heavy chain constant region FC FRAGMENT 9606
81 3C2S 1 A IGHM protein ANTIBODY FC FRAGMENT, residues 256-480 9606
82 4Q7D 1 A, B Ig gamma-1 chain C region UNP residues 109-329 9606
83 6F2Z 1 A, B Fc fragment of antiboy 9606
84 5DJD 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
85 5DJD 2 B Ig gamma-1 chain C region UNP residues 104-330 9606
86 5DVN 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
87 4BYH 1 A, B IG GAMMA-1 CHAIN C REGION RESIDUES 106-329 9606
88 4ZNE 2 E, J Ig gamma-1 chain C region unp residues 104-330 9606
89 3SGK 1 A, B Fc fragment unp residues 106-330 9606
90 2IWG 1 A, D IG GAMMA-1 CHAIN C RESIDUES 120-326 9606
91 5DK0 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
92 5DK0 2 B Ig gamma-1 chain C region UNP residues 104-330 9606
93 5NSC 1 A Putative uncharacterized protein DKFZp686C11235 9606
94 5NSC 2 B Putative uncharacterized protein DKFZp686C11235 9606
95 5DVO 1 A, B Ig gamma-1 chain C region UNP residues 104-330 9606
96 4B7I 1 A, B IG GAMMA-1 CHAIN C REGION IMMUNOGLOBULIN GAMMA, FC, RESIDUES 120-329 9606
97 5U4Y 1 A, B IgG1 fc unp residues 261-472 9606
98 4ACP 1 A, B IG GAMMA-1 CHAIN C REGION IMMUNOGLOBULIN GAMMA, FC, RESIDUES 101-329 9606
99 5IW6 1 A Ig gamma-1 chain C region UNP residues 119-327 9606
100 5IW6 2 B Ig gamma-1 chain C region UNP residues 122-326 9606
101 6BZ4 1 A, B Immunoglobulin gamma-1 heavy chain 9606
102 5DJ2 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
103 5DJ2 2 B Ig gamma-1 chain C region UNP residues 104-330 9606
104 5DJ8 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
105 5DJ8 2 B Ig gamma-1 chain C region UNP residues 104-330 9606
106 4CDH 1 A, B IG GAMMA-1 CHAIN C REGION FC, RESIDUES 101-330 9606
107 6CHF 1 A, B Uncharacterized protein DKFZp686C11235 9606
108 6FGO 1 A, B, C, D Immunoglobulin gamma-1 heavy chain 9606
109 6CJC 1 A, B Uncharacterized protein DKFZp686C11235 9606
110 5K64 1 A, B Ig gamma-1 chain C region 9606
111 5LG1 1 A, B Ig gamma-4 chain C region HUMAN IGG 4 FC REGION 9606
112 6CJX 1 A, B Fc fragment of human IgG1 9606
113 5XJE 1 A, B Immunoglobulin gamma-1 heavy chain Fc fragment UNP RESIDUES 227-449 9606
114 6D58 1 A, B Immunoglobulin heavy constant gamma 3 9606
115 2WAH 1 A, B IG GAMMA-1 CHAIN C REGION HOMOGENOUS (MAN)9(NAG)2 GLYCOFORM OF HUMAN IGG1 FC. IMMUNOGLOBULIN GAMMA, FC, RESIDUES 120-328 9606
116 5XJF 1 A, B Immunoglobulin gamma-1 heavy chain Fc fragment UNP RESIDUES 227-449 9606
117 5K65 1 A, B Ig gamma-1 chain C region 9606
118 5D4Q 1 A, B Ig gamma-1 chain C region UNP residues 109-329 9606
119 4NQU 1 A Ig gamma-1 chain C region UNP residues 118-330 9606
120 1DN2 1 A, B IMMUNOGLOBULIN LAMBDA HEAVY CHAIN FC FRAGMENT 9606
121 3FJT 1 A, B Ig gamma-1 chain C region UNP residues 119-327 9606
122 4X98 1 A Ig gamma-1 chain C region UNP RESIDUES 108-327 9606
123 4X98 2 B Ig gamma-1 chain C region UNP RESIDUES 121-327 9606
124 5HYI 1 A, B, C, D Ig gamma-1 chain C region UNP residues 104-330 9606
125 1OQX 1 A, B immunoglobulin gamma-1 heavy chain constant region Fc Fragment 9606
126 5TPS 1 B Ig gamma-1 chain C region UNP residues 104-330 9606
127 5TPS 2 A Ig gamma-1 chain C region UNP residues 104-330 9606
128 4WI9 1 A, B Ig gamma-1 chain C region unp residues 120-327 9606
129 1H3U 1 A, B IG GAMMA-1 CHAIN C REGION CH2, CH3, RESIDUES 225-447 9606
130 5WAV 1 A, B Immunoglobulin gamma-1 heavy chain,Immunoglobulin gamma-1 heavy chain 9606
131 4D2N 1 A, B, C, D IG GAMMA-4 CHAIN C REGION FC FRAGMENT, RESIDUES 102-327 9606
132 2QL1 1 A IGHM protein Antibody Fc fragment 9606
133 6N9T 1 A, B Immunoglobulin G1 FC residues 249-472 9606
134 5YC5 1 A, B Immunoglobulin gamma-1 heavy chain Fc fragment, UNP residues 226-448 9606
135 5DK2 1 A, D Ig gamma-1 chain C region UNP residues 104-330 9606
136 5DK2 2 B, E Ig gamma-1 chain C region UNP residues 104-330 9606
137 5HY9 1 A Ig gamma-1 chain C region Knob protein 9606
138 5HY9 2 B Ig gamma-1 chain C region Hole protein 9606
139 3WJJ 1 A, B Ig gamma-1 chain C region UNP RESIDUES 99-328 9606
140 4X99 1 A Ig gamma-1 chain C region UNP RESIDUES 108-330 9606
141 4X99 2 B Ig gamma-1 chain C region UNP RESIDUES 108-330 9606
142 4NQS 1 A, G Ig gamma-1 chain C region UNP residues 118-330 9606
143 4NQS 2 B, H Ig gamma-1 chain C region UNP residues 118-330 9606
144 5DVK 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
145 4WI3 1 A, B Ig gamma-1 chain C region unp residues 120-327 9606
146 3WKN 1 A, B, C, D, I, J, M, N Ig gamma-1 chain C region UNP residues 119-330 9606
147 4WI8 1 A, B Ig gamma-1 chain C region 9606
148 1H3T 1 A, B IG GAMMA-1 CHAIN C REGION CH2, CH3, RESIDUES 225-447 9606
149 5DJA 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
150 5DJA 2 B Ig gamma-1 chain C region UNP residues 104-330 9606
151 5XMH 1 A, B Immunoglobulin gamma-1 heavy chain UNP RESIDUES 239-446 9606
152 6D4E 1 A, B Fc Fragment of IgG1 9544
153 6IQG 1 A, B Immunoglobulin gamma-1 heavy chain 9606
154 1H3X 1 A, B IG GAMMA-1 CHAIN C REGION CH2, CH3, RESIDUES 225-447 9606
155 6D4I 1 A, B Fc fragment of IgG2 9544
156 5BW7 1 A, B Ig gamma-1 chain C region UNP residues 108-330 9606
157 4WI5 1 A, B Ig gamma-1 chain C region unp residues 120-327 9606
158 3WN5 1 A, D Ig gamma-1 chain C region UNP RESIDUES 99-328 9606
159 3WN5 2 B, E Ig gamma-1 chain C region UNP RESIDUES 99-328 9606
160 3DO3 1 A, B Ig gamma-1 chain C region Fc domain including CH2 and CH3 regions: UNP Residues 119-330 9606
161 3WJL 1 A, B Ig gamma-1 chain C region UNP RESIDUES 216-445 9606
162 3V95 1 A, B Ig gamma-1 chain C region unp residues 119-330 9606
163 5Y56 1 A, B Immunoglobulin gamma-1 heavy chain UNP residues 238-445 9606
164 5DVM 1 A Ig gamma-1 chain C region UNP residues 104-330 9606
165 3DNK 1 A, B IGHM protein UNP residues 267-478 9606
166 4WI4 1 A, B Ig gamma-1 chain C region unp residues 120-317 9606
167 2J6E 1 A, B IG GAMMA-1 CHAIN C REGION FC DOMAIN, RESIDUES 99-330 9606
168 1T83 1 A, B IGG1 Fc 9606
169 6IQH 1 A, B Immunoglobulin gamma-1 heavy chain 9606
170 3V8C 1 A, B Ig gamma-1 chain C region unp residues 119-330 9606
171 6D4N 1 A, B Fc fragment of IgG4 9544
172 1ADQ 1 A IGG4 REA FC FC 9606
173 5VME 1 A, B human IgG1 Fc K248E,T437R mutant 9606
174 1H3V 1 A, B IG GAMMA-1 CHAIN C REGION CH2, CH3, RESIDUES 225-447 9606
175 5K33 1 A Ig gamma-1 chain C region 9606
176 4Q6Y 1 A, B, C, D Ig gamma-1 chain C region UNP residues 109-329 9606
177 5V4E 1 A, B, C, D, E, F, G, H Ig gamma-1 chain C region residues 104-329 9606
178 1H3W 1 M IG GAMMA-1 CHAIN C REGION CH2, CH3, RESIDUES 225-447 9606
179 3S7G 1 A, B, C, D Ig gamma-1 chain C region FC PORTION OF IGG1 CH2 and CH3 regions, UNP RESIDUES 104-330 9606
180 5D6D 1 A, B Ig gamma-1 chain C region UNP residues 109-329 9606
181 1E4K 1 A, B FC FRAGMENT OF HUMAN IGG1 FC FRAGMENT 9606
182 1T89 1 A, B recombinant IgG1 heavy chain Fc fragment of human IgG1 9606
183 4X4M 1 A, B, C, D Ig gamma-1 chain C region CH2 and CH3 regions, residues 112-330 9606
184 6D4M 1 A, B Fc fragment of IgG3 9544
185 4QGT 1 A, B Hepatitis B virus receptor binding protein 9606
186 1FCC 1 A, B IGG1 MO61 FC 9606
187 3RY6 1 A, B Ig gamma-1 chain C region UNP residues 114-327 9606
188 4HAG 1 A Ig gamma-2 chain C region CH2, CH3 DOMAINS 9606
189 6MJ3 1 A, B, D, E Igg1 Fc 9544
190 4N0U 4 E Ig gamma-1 chain C region IgG1 Fc, unp reisdues 119-327 9606
191 1H3Y 1 A, B IG GAMMA-1 CHAIN C REGION CH2, CH3, RESIDUES 225-447 9606
192 5KWG 2 A Ig gamma-1 chain C region 9606
193 1FRT 3 C IGG FC 10116
194 4NHH 3 A, B, C, D, J, N 2G12 IgG dimer heavy chain unp residues 139-348 9606
195 4NHG 3 J, N, O, P, X, Y Hepatitis B virus receptor binding protein unp residues 139-348 9606
196 6FCZ 4 H, K Immunoglobulin gamma-1 heavy chain UNP residues 234-449 9606
197 2GJ7 1 A, B Ig gamma-1 chain C region Fc fragment 9606
198 1FC1 1 A, B FC FRAGMENT 9606
199 1FC2 2 D IMMUNOGLOBULIN FC 9606