Sequence Similarity Clusters for the Entities in PDB 5HKX

Entity #1 | Chains: A
E3 ubiquitin-protein ligase CBL protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64396
95 % 1 8 3883 Flexibility: Medium
Max RMSD: 22.6, Avg RMSD: 9.1
PDBFlex
90 % 1 8 4141
70 % 1 10 2872
50 % 1 10 2795
40 % 1 10 2799
30 % 1 10 2778

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures