Sequence Similarity Clusters for the Entities in PDB 5HGW

Entity #1 | Chains: A,B
Peptide deformylase protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 33724
95 % 1 3 22575 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 1 3 19211
70 % 1 5 6616
50 % 1 21 2682
40 % 1 27 1565
30 % 10 127 261

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures