Sequence Similarity Clusters for the Entities in PDB 5HGV

Entity #1 | Chains: A,C
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit protein, length: 719 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40617
95 % 16 32 993 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 16 32 1030
70 % 16 33 992
50 % 16 33 1028
40 % 16 33 1071
30 % 16 33 1110
Entity #2 | Chains: B,D
TYR-PRO-GLY-GLY-SER-THR-PRO-VAL-SER-SER-ALA-ASN-MET-MET protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures