Sequence Similarity Clusters for the Entities in PDB 5GTO

Entity #1 | Chains: A
Peroxisome proliferator-activated receptor gamma protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 28 134 132
95 % 59 210 109 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.7
PDBFlex
90 % 59 210 114
70 % 45 167 161
50 % 72 228 122
40 % 72 228 142
30 % 297 724 14
Entity #2 | Chains: B
Nuclear receptor coactivator 1 protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures