Sequence Similarity Clusters for the Entities in PDB 5GSQ

Entity #1 | Chains: A,B,C,D
Ig gamma-1 chain C region protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 35 517
95 % 24 179 119 Flexibility: Low
Max RMSD: 10.4, Avg RMSD: 1.5
PDBFlex
90 % 13 89 256
70 % 27 196 124
50 % 29 207 129
40 % 29 207 148
30 % 30 210 152

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures