Sequence Similarity Clusters for the Entities in PDB 5GOK

Entity #1 | Chains: A
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 388 4
95 % 131 485 6
90 % 135 499 6
70 % 147 549 9
50 % 150 564 11
40 % 150 568 14
30 % 154 584 18
Entity #2 | Chains: B
D-ubiquitin protein_D, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 106 388 4
95 % 132 485 6
90 % 136 499 6
70 % 148 549 9
50 % 151 564 11
40 % 151 568 14
30 % 155 584 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures