Sequence Similarity Clusters for the Entities in PDB 5G1D

Entity #1 | Chains: A,B
SYNTENIN-1 protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 24438
95 % 2 2 24544 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 2 2 23775
70 % 2 2 21708
50 % 2 2 19183
40 % 2 2 17624
30 % 2 2 15831
Entity #2 | Chains: C,D
SYNDECAN-4 protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures