Sequence Similarity Clusters for the Entities in PDB 5F5A

Entity #1 | Chains: A
Lysine-specific demethylase 4D protein, length: 346 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 111 273 102
95 % 111 274 137 Flexibility: No
Max RMSD: 4.8, Avg RMSD: 0.3
PDBFlex
90 % 111 274 139
70 % 111 275 154
50 % 111 345 96
40 % 111 345 116
30 % 111 345 121

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures