Sequence Similarity Clusters for the Entities in PDB 5F1O

Entity #1 | Chains: A
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 18 1418
95 % 32 42 686 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.1
PDBFlex
90 % 32 42 717
70 % 32 42 752
50 % 32 42 790
40 % 36 49 703
30 % 36 49 734
Entity #2 | Chains: B
nanobody MU551 protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 86832
95 % 1 1 58865
90 % 1 1 55488
70 % 209 610 7
50 % 286 877 4
40 % 286 894 5
30 % 417 1317 5

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures