Sequence Similarity Clusters for the Entities in PDB 5EVI

Entity #1 | Chains: A
Beta-Lactamase/D-Alanine Carboxypeptidase protein, length: 366 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 23034
95 % 1 4 22837 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 4 22160
70 % 1 4 20306
50 % 30 47 1282
40 % 88 196 152
30 % 88 196 158
Entity #2 | Chains: B
Beta-Lactamase/D-Alanine Carboxypeptidase protein, length: 366 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 23034
95 % 2 4 22837 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 4 22160
70 % 2 4 20306
50 % 31 47 1282
40 % 89 196 152
30 % 89 196 158
Entity #3 | Chains: C
Beta-Lactamase/D-Alanine Carboxypeptidase protein, length: 366 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 23034
95 % 3 4 22837 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 3 4 22160
70 % 3 4 20306
50 % 32 47 1282
40 % 90 196 152
30 % 90 196 158
Entity #4 | Chains: D
Beta-Lactamase/D-Alanine Carboxypeptidase protein, length: 366 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 23034
95 % 4 4 22837 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 4 4 22160
70 % 4 4 20306
50 % 33 47 1282
40 % 91 196 152
30 % 91 196 158

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures