Sequence Similarity Clusters for the Entities in PDB 5EML

Entity #1 | Chains: A
Protein arginine N-methyltransferase 5 protein, length: 645 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 8 10465
95 % 5 11 7532 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 5 11 7506
70 % 5 12 6014
50 % 5 12 5803
40 % 5 12 5641
30 % 5 12 5380
Entity #2 | Chains: B
Methylosome protein 50 protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 6688
95 % 5 11 7404 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 5 11 7392
70 % 5 11 7289
50 % 5 12 5703
40 % 5 12 5546
30 % 5 12 5286

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures