Sequence Similarity Clusters for the Entities in PDB 5ELS

Entity #1 | Chains: A,B,C,D,E,F
KH domain-containing, RNA-binding, signal transduction-associated protein 3 protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 7200
95 % 2 2 7335 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 2 2 7295
70 % 2 2 7073
50 % 2 2 6497
40 % 2 2 6027
30 % 2 2 5292
Entity #2 | Chains: H,I
RNA (5'-R(P*AP*AP*AP*UP*AP*A)-3') rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5EL3 1 A, B, C, D KH domain-containing, RNA-binding, signal transduction-associated protein 3 N-terminus GA from tag. RNA binding protein, residues 50-160 9606
2 5ELS 1 A, B, C, D, E, F KH domain-containing, RNA-binding, signal transduction-associated protein 3 N-terminus GA residues from tag. RNA binding protein, UNP residues 50-160 9606