Sequence Similarity Clusters for the Entities in PDB 5ELS

Entity #1 | Chains: A,B,C,D,E,F
KH domain-containing, RNA-binding, signal transduction-associated protein 3 protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 6897
95 % 2 2 7472 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 2 2 7425
70 % 2 2 7229
50 % 2 2 6661
40 % 2 2 6206
30 % 2 2 5551
Entity #2 | Chains: H,I
RNA (5'-R(P*AP*AP*AP*UP*AP*A)-3') rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures