Sequence Similarity Clusters for the Entities in PDB 5EG3

Entity #1 | Chains: A
Fibroblast growth factor receptor 2 protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72805
95 % 19 24 1222 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.1
PDBFlex
90 % 19 24 1254
70 % 76 103 282
50 % 139 187 175
40 % 537 707 13
30 % 824 1146 8
Entity #2 | Chains: B
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 10 4634
95 % 7 10 5424 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.1
PDBFlex
90 % 7 10 5465
70 % 7 10 5286
50 % 7 10 5085
40 % 7 10 4947
30 % 28 37 1636

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5TNW 1 A, B 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 Electron density suggests a modification to the side chain of cysteine 715 in both chains A and B. The chemical composition of the modification was unclear, and was consequently left out of the final model. UNP residues 663-759 9913 3.1.4.11 | Details
2 4K45 1 A 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 C-terminal SH2 (cSH2) domain 10116 2.7.1.173 | Details 3.1.4.11 | Details
3 5TQ1 1 A 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 UNP residues 663-759 9913 3.1.4.11 | Details
4 4K44 1 A, B 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 C-terminal SH2 (cSH2) domain 10116 2.7.1.173 | Details 3.1.4.11 | Details
5 5TO4 1 A 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 Scattered electron density was also present for at least two additional polymers, likely low molecular weight polyethylene glycol molecules. However, the molecules could not be fit into the density non-ambiguously and were consequently omitted from the model. UNP residues 663-759 9913 3.1.4.11 | Details
6 5TQS 1 A, B, C, D 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 UNP residues 663-759 9913 3.1.4.11 | Details
7 5EG3 2 B 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 UNP residues 661-773 10116 2.7.1.173 | Details 3.1.4.11 | Details
8 2FCI 2 A C-termainl SH2 domain from phospholipase C-gamma-1 comprising residues 663-759 C-terminal SH2 domain 9913 3.1.4.11 | Details
9 2PLD 1 A PHOSPHOLIPASE C GAMMA-1, C-TERMINAL SH2 DOMAIN 9913 3.1.4.11 | Details
10 2PLE 1 A PHOSPHOLIPASE C GAMMA-1, C-TERMINAL SH2 DOMAIN 9913 3.1.4.11 | Details