Sequence Similarity Clusters for the Entities in PDB 5DYV

Entity #1 | Chains: A,B,C,D,E,F,G,H
YD repeat-containing protein protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 10523
95 % 2 2 6730 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 2 6743
70 % 2 2 6638
50 % 2 2 6318
40 % 2 2 6134
30 % 2 2 5775

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures