Sequence Similarity Clusters for the Entities in PDB 5DQO

Entity #1 | Chains: A,B,C,D
DNA primase large subunit protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26124
95 % 5 7 4774 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 2.4
PDBFlex
90 % 5 7 4817
70 % 5 7 4824
50 % 5 7 4692
40 % 5 7 4566
30 % 5 7 4413

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures