Sequence Similarity Clusters for the Entities in PDB 5D7R

Entity #1 | Chains: A,B
DNA gyrase subunit B protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 16 1595
95 % 6 17 1951 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 6 17 1998
70 % 6 19 1598
50 % 6 19 1613
40 % 8 65 536
30 % 8 65 558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures