Sequence Similarity Clusters for the Entities in PDB 5D0J

Entity #1 | Chains: A,B,C,D
Growth factor receptor-bound protein 7 protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 1301
95 % 8 12 1725 Flexibility: Low
Max RMSD: 5.7, Avg RMSD: 1.2
PDBFlex
90 % 8 12 1761
70 % 8 11 1913
50 % 8 11 1962
40 % 8 11 2008
30 % 8 11 2044
Entity #2 | Chains: L,M
G7-TEdFP peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures