Sequence Similarity Clusters for the Entities in PDB 5CM1

Entity #1 | Chains: A,B
Transthyretin protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 5137
95 % 16 312 11 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 16 317 13
70 % 16 301 23
50 % 16 312 39
40 % 16 312 47
30 % 16 312 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures