Sequence Similarity Clusters for the Entities in PDB 5CCV

Entity #1 | Chains: A,B,C,D,E,F,G,H
RNA-directed RNA polymerase NS5 protein, length: 905 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9570
95 % 6 6 5822 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.2
PDBFlex
90 % 6 6 5864
70 % 6 6 5783
50 % 10 13 1707
40 % 10 13 1751
30 % 10 13 1777

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures