Sequence Similarity Clusters for the Entities in PDB 5CCQ

Entity #1 | Chains: A
Peptidyl-prolyl cis-trans isomerase F, mitochondrial protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 33 41 1075
95 % 33 43 1309 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 33 43 1339
70 % 119 199 152
50 % 128 236 133
40 % 128 238 148
30 % 128 238 155

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures