Sequence Similarity Clusters for the Entities in PDB 5B5Q

Entity #1 | Chains: A
Membrane thiol protease protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 8317
95 % 2 8 7936 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 2 8 7904
70 % 2 8 7751
50 % 2 8 7288
40 % 2 8 7028
30 % 2 8 6588
Entity #2 | Chains: B
Membrane thiol protease protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 8317
95 % 3 8 7936 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 3 8 7904
70 % 3 8 7751
50 % 3 8 7288
40 % 3 8 7028
30 % 3 8 6588

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures