Sequence Similarity Clusters for the Entities in PDB 5AWJ

Entity #1 | Chains: A
Vitamin D3 receptor,Vitamin D3 receptor protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 36 57 834
95 % 41 63 994 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 76 108 513
70 % 76 108 542
50 % 81 144 442
40 % 81 144 467
30 % 81 144 480
Entity #2 | Chains: C
Mediator of RNA polymerase II transcription subunit 1 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures