Sequence Similarity Clusters for the Entities in PDB 4ZMA

Entity #1 | Chains: L
Coagulation factor VII protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 32 1562
95 % 23 32 2080 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 23 32 2140
70 % 23 32 2209
50 % 62 74 860
40 % 62 74 906
30 % 66 79 864
Entity #2 | Chains: H
Coagulation factor VII protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 77128
95 % 86 101 493 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.6
PDBFlex
90 % 86 101 521
70 % 86 101 553
50 % 86 101 578
40 % 248 290 180
30 % 1690 1921 5
Entity #3 | Chains: T
Tissue factor protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 39 1158
95 % 28 40 1516 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.0
PDBFlex
90 % 28 40 1555
70 % 29 41 1490
50 % 29 41 1515
40 % 29 41 1569
30 % 29 41 1594

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures