Sequence Similarity Clusters for the Entities in PDB 4YYK

Entity #1 | Chains: A,B,D,E
Bromodomain-containing protein 9 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 18 1851
95 % 17 18 2421 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 27 32 1168
70 % 27 33 1114
50 % 28 35 1096
40 % 28 35 1136
30 % 28 35 1176
Entity #2 | Chains: C,F
Histone H4 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures