Sequence Similarity Clusters for the Entities in PDB 4YOJ

Entity #1 | Chains: A,B
3C-like proteinase protein, length: 306 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 6687
95 % 3 6 7295 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 3 6 7291
70 % 7 16 2129
50 % 20 110 355
40 % 23 132 235
30 % 23 132 248

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2YNA 1 A, B 3C-LIKE PROTEINASE 694007 3.4.22 | Details 3.4.22.69 | Details
2 4YOI 1 A, B 3C-like proteinase 694007 3.4.22 | Details
3 4YOJ 1 A, B 3C-like proteinase 694007 3.4.22 | Details
4 2YNB 1 A, B 3C-LIKE PROTEINASE SG85 IS LINKED TO CYSTEINE 148 OF CHAIN B 694007 3.4.22.69 | Details
5 4YOG 1 A, B 3C-like proteinase 694007 3.4.22 | Details
6 4YO9 1 A, B 3C-like proteinase 694007 3.4.22 | Details