Sequence Similarity Clusters for the Entities in PDB 4YOG

Entity #1 | Chains: A,B
3C-like proteinase protein, length: 306 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 5339
95 % 5 6 6174 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 5 6 6212
70 % 9 16 2080
50 % 30 110 340
40 % 34 132 226
30 % 34 132 239

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures