Sequence Similarity Clusters for the Entities in PDB 4XXB

Entity #1 | Chains: A
60S ribosomal protein L11 protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 58 807
95 % 1 66 894
90 % 1 66 931
70 % 1 170 254
50 % 1 174 263
40 % 1 174 278
30 % 1 174 298
Entity #2 | Chains: B
E3 ubiquitin-protein ligase Mdm2 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67213
95 % 1 1 48772
90 % 1 1 50868
70 % 1 1 40631
50 % 1 1 38437
40 % 1 1 31798
30 % 1 1 28057

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures