Sequence Similarity Clusters for the Entities in PDB 4XS0

Entity #1 | Chains: A
Hemoglobin subunit alpha protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 187 219 43
95 % 223 256 40 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 224 257 44
70 % 290 340 22
50 % 638 735 7
40 % 638 735 7
30 % 686 783 10
Entity #2 | Chains: B
Hemoglobin subunit beta protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 142 166 78
95 % 229 257 36 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 233 261 37
70 % 307 353 17
50 % 639 735 7
40 % 639 735 7
30 % 687 783 10
Entity #3 | Chains: C
Iron-regulated surface determinant protein H protein, length: 336 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 68920
95 % 1 2 17011 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 1 2 16726
70 % 1 2 15642
50 % 1 3 10718
40 % 1 3 10083
30 % 1 3 9333

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures