Sequence Similarity Clusters for the Entities in PDB 4XL5

Entity #1 | Chains: A
Green fluorescent protein protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25064
95 % 225 288 70 Flexibility: Low
Max RMSD: 22.5, Avg RMSD: 1.0
PDBFlex
90 % 239 334 36
70 % 241 340 41
50 % 241 341 76
40 % 242 342 89
30 % 242 342 91
Entity #2 | Chains: C
bGFP-A protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73584
95 % 1 1 52649
90 % 1 1 49845
70 % 1 1 43587
50 % 1 1 37679
40 % 1 1 34055
30 % 1 1 30032

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures