Sequence Similarity Clusters for the Entities in PDB 4XCC

Entity #1 | Chains: L
4E10 Fab light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 22 989
95 % 19 22 1364 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 165 244 75
70 % 1686 2416 2
50 % 2100 3067 2
40 % 2100 3067 2
30 % 4266 6228 1
Entity #2 | Chains: H
4E10 Fab Heavy chain protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 20 1068
95 % 20 23 1372 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 20 23 1402
70 % 2029 2965 1
50 % 2138 3117 1
40 % 2138 3117 1
30 % 4267 6228 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures