Sequence Similarity Clusters for the Entities in PDB 4X0Y

Entity #1 | Chains: A,B,C,D,E
Major capsid protein protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 1862
95 % 1 18 629 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 1 18 657
70 % 2 22 534
50 % 7 48 147
40 % 7 48 161
30 % 7 52 157

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4X0Y 1 A, B, C, D, E Major capsid protein UNP residues 23-290 1891763
2 4X17 1 A, B, C, D, E Major capsid protein VP1 UNP residues 23-290 1891763
3 4WDZ 1 A, B, C, D, E Major capsid protein VP1 UNP residues 23-290 1891763
4 4X16 1 A, B, C, D, E Major capsid protein VP1 UNP residues 23-290 1891763
5 4X0Z 1 A, B, C, D, E Major capsid protein UNP residues 23-290 1891763
6 4JCE 1 A, B, C, D, E Major capsid protein VP1 1891763
7 4X12 1 A, B, C, D, E Major capsid protein UNP residues 23-290 1891763
8 4X10 1 A, B, C, D, E Major capsid protein UNP residues 23-290 1891763
9 4X13 1 A, B, C, D, E Major capsid protein UNP residues 23-290 1891763
10 3NXG 1 A, B, C, D, E Major capsid protein VP1 UNP residues 23-290 1891763
11 4JCD 1 A, B, C, D, E Major capsid protein VP1 1891763
12 4WDY 1 A, B, C, D, E Major capsid protein VP1 UNP Residues 23-290 1891763
13 3NXD 1 A, B, C, D, E Major capsid protein VP1 UNP residues 23-290 1891763
14 4X15 1 A, B, C, D, E Major capsid protein VP1 UNP residues 23-290 1891763
15 4WE0 1 A, B, C, D, E Major capsid protein VP1 1891763
16 4JCF 1 A, B, C, D, E Major capsid protein VP1 1891763
17 4X11 1 A, B, C, D, E Major capsid protein UNP residues 23-290 1891763
18 4X14 1 A, B, C, D, E Major capsid protein VP1 UNP residues 23-290 1891763