Sequence Similarity Clusters for the Entities in PDB 4X0Y

Entity #1 | Chains: A,B,C,D,E
Major capsid protein protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 1797
95 % 1 18 633 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 1 18 664
70 % 2 22 534
50 % 7 48 144
40 % 7 48 160
30 % 7 52 152

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4X0Y 1 A, B, C, D, E Major capsid protein UNP residues 23-290 1891763
2 4X0Z 1 A, B, C, D, E Major capsid protein UNP residues 23-290 1891763
3 4X12 1 A, B, C, D, E Major capsid protein UNP residues 23-290 1891763
4 4X10 1 A, B, C, D, E Major capsid protein UNP residues 23-290 1891763
5 4X13 1 A, B, C, D, E Major capsid protein UNP residues 23-290 1891763
6 4X11 1 A, B, C, D, E Major capsid protein UNP residues 23-290 1891763