Sequence Similarity Clusters for the Entities in PDB 4WZ3

Entity #1 | Chains: A
Ubiquitin-conjugating enzyme E2 D2 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 33739
95 % 31 47 892 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 36 58 680
70 % 38 63 653
50 % 42 68 584
40 % 68 112 345
30 % 105 176 205
Entity #2 | Chains: B
E3 ubiquitin-protein ligase LubX protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 76279
95 % 1 1 46502
90 % 1 1 44109
70 % 1 1 38843
50 % 1 1 33616
40 % 1 1 30451
30 % 1 1 26912

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures