Sequence Similarity Clusters for the Entities in PDB 4WK2

Entity #1 | Chains: A
Integrin alpha-5 protein, length: 452 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 22923
95 % 4 4 22624 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 4 4 22017
70 % 4 4 19667
50 % 4 4 17915
40 % 18 30 1477
30 % 18 30 1515
Entity #2 | Chains: B
Integrin beta-1 protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 22924
95 % 4 6 10733 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 4 6 10599
70 % 4 6 10205
50 % 4 6 9442
40 % 20 43 1040
30 % 20 43 1088
Entity #3 | Chains: C
GLY-ARG-GLY-ASP-SER-PRO protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures