Sequence Similarity Clusters for the Entities in PDB 4UXO

Entity #1 | Chains: A
TUBULIN ALPHA-1B CHAIN protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 29 1532
95 % 212 248 12
90 % 213 249 15
70 % 227 263 21
50 % 227 263 43
40 % 454 526 8
30 % 462 534 11
Entity #2 | Chains: B
TUBULIN BETA-2B CHAIN protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 57 109
95 % 210 245 13
90 % 220 255 13
70 % 228 263 20
50 % 228 263 41
40 % 455 526 8
30 % 463 534 11
Entity #3 | Chains: C
KINESIN-3 MOTOR DOMAIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 25195
95 % 12 18 4335
90 % 12 18 4225
70 % 12 18 4211
50 % 16 22 2824
40 % 97 109 373
30 % 133 154 231

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures