Sequence Similarity Clusters for the Entities in PDB 4UPA

Entity #1 | Chains: A
LYSINE--TRNA LIGASE protein, length: 777 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 32809
95 % 2 4 24198 Flexibility: Medium
Max RMSD: 12.5, Avg RMSD: 7.3
PDBFlex
90 % 2 4 23457
70 % 2 4 20820
50 % 2 4 18413
40 % 2 4 16936
30 % 2 4 15242

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures