Sequence Similarity Clusters for the Entities in PDB 4UHV

Entity #1 | Chains: A,B
VGRG1, VALINE-GLYCINE REPEAT PROTEIN G1 protein, length: 651 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 4630
95 % 1 4 5436 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 1 4 5409
70 % 1 4 5587
50 % 1 4 5166
40 % 1 4 5274
30 % 1 4 4820

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4UHV 1 A, B VGRG1, VALINE-GLYCINE REPEAT PROTEIN G1 287
2 4MTK 1 A, B, C, D, E, F VgrG1 287
3 6H3L 1 A, B, C VgrG1 287
4 6H3N 1 A, B, C VgrG1 287