Sequence Similarity Clusters for the Entities in PDB 4TV9

Entity #1 | Chains: A,C
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 166 43
95 % 10 260 13 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 10 261 15
70 % 10 277 13
50 % 10 277 17
40 % 19 554 3
30 % 19 565 8
Entity #2 | Chains: B,D
Tubulin beta-2B chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 108 176
95 % 9 256 14 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 10 269 8
70 % 10 277 12
50 % 10 277 16
40 % 20 554 3
30 % 20 565 8
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 104 404
95 % 6 118 449 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.9
PDBFlex
90 % 6 118 481
70 % 6 118 509
50 % 6 118 536
40 % 6 118 578
30 % 6 118 601
Entity #4 | Chains: F
Uncharacterized protein protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 104 405
95 % 6 104 536 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 0.8
PDBFlex
90 % 6 104 561
70 % 6 107 557
50 % 6 107 599
40 % 6 107 638
30 % 6 107 660

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures