Sequence Similarity Clusters for the Entities in PDB 4TKP

Entity #1 | Chains: A
Ubiquitin-conjugating enzyme E2 N protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 15 1154
95 % 10 26 952 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.0
PDBFlex
90 % 10 26 998
70 % 10 26 1018
50 % 10 26 1071
40 % 54 107 314
30 % 82 181 190
Entity #2 | Chains: B
Tripartite motif-containing protein 5 protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64494
95 % 1 1 48184
90 % 1 1 44655
70 % 1 1 39363
50 % 1 1 34038
40 % 1 1 30787
30 % 1 3 11731

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4TKP 2 B Tripartite motif-containing protein 5 UNP residues 2-92 9544 2.3.2.27 | Details