Sequence Similarity Clusters for the Entities in PDB 4TKP

Entity #1 | Chains: A
Ubiquitin-conjugating enzyme E2 N protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 15 1149
95 % 10 26 935 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.0
PDBFlex
90 % 10 26 976
70 % 10 26 1008
50 % 10 26 1061
40 % 54 106 323
30 % 82 180 193
Entity #2 | Chains: B
Tripartite motif-containing protein 5 protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64256
95 % 1 1 46876
90 % 1 1 44507
70 % 1 1 39219
50 % 1 1 33931
40 % 1 1 30676
30 % 1 3 11664

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures