Sequence Similarity Clusters for the Entities in PDB 4S0T

Entity #1 | Chains: A,B
Nuclear receptor subfamily 1 group I member 2 protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 21 1638
95 % 22 23 1870 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.8
PDBFlex
90 % 22 23 1913
70 % 22 23 1938
50 % 22 23 1969
40 % 22 23 2030
30 % 22 23 2054
Entity #2 | Chains: D,E
Adnectin-1 protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27975
95 % 2 2 23413 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 2 2 22720
70 % 2 2 21279
50 % 2 2 18821
40 % 2 2 16883
30 % 2 2 15169

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures