Sequence Similarity Clusters for the Entities in PDB 4RYF

Entity #1 | Chains: A,B,C,D,E,F,G
ATP-dependent Clp protease proteolytic subunit protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 1531
95 % 3 4 1191 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.1
PDBFlex
90 % 3 4 1213
70 % 3 4 1243
50 % 3 4 1278
40 % 37 67 23
30 % 37 67 29
Entity #2 | Chains: H,I,J,K,L,M,N
ATP-dependent Clp protease proteolytic subunit protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 5034
95 % 1 3 3721 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 1 3 3788
70 % 14 27 149
50 % 35 63 19
40 % 38 67 23
30 % 38 67 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures