Sequence Similarity Clusters for the Entities in PDB 4RF1

Entity #1 | Chains: A
ORF1ab protein protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 10 5831
95 % 2 12 5570 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.3
PDBFlex
90 % 2 12 5597
70 % 2 12 5543
50 % 2 12 5202
40 % 2 12 5063
30 % 8 26 2032
Entity #2 | Chains: B
Ubiquitin-60S ribosomal protein L40 protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 134 393 4
95 % 164 491 6 Flexibility: Low
Max RMSD: 12.4, Avg RMSD: 1.4
PDBFlex
90 % 169 504 6
70 % 187 555 9
50 % 189 570 10
40 % 189 574 12
30 % 196 595 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures