Sequence Similarity Clusters for the Entities in PDB 4R4B

Entity #1 | Chains: A,C,E,L
FAB 2.2C LIGHT CHAIN protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 4935
95 % 1 4 5567 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.3
PDBFlex
90 % 143 528 4
70 % 601 2351 2
50 % 766 2982 2
40 % 766 2982 2
30 % 1570 6051 1
Entity #2 | Chains: B,D,F,H
FAB 2.2C HEAVY CHAIN protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 4718
95 % 1 4 5549 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 1.9
PDBFlex
90 % 1 4 5599
70 % 747 2882 1
50 % 793 3027 1
40 % 793 3027 1
30 % 1571 6051 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures