Sequence Similarity Clusters for the Entities in PDB 4QTU

Entity #1 | Chains: A,C
Multifunctional methyltransferase subunit TRM112 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 18112
95 % 3 3 17120 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.8
PDBFlex
90 % 3 3 16815
70 % 3 3 15741
50 % 3 3 14189
40 % 3 4 12317
30 % 5 8 6895
Entity #2 | Chains: B,D
Putative methyltransferase BUD23 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 19970
95 % 2 2 18359 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 2 2 18007
70 % 2 2 19953
50 % 2 2 17650
40 % 2 2 16276
30 % 2 2 12648

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures