Sequence Similarity Clusters for the Entities in PDB 4QDH

Entity #1 | Chains: A,B
Variable lymphocyte receptor B, Toll-like receptor 9 chimera protein, length: 438 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41968
95 % 1 1 33373 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 31991
70 % 1 1 31749
50 % 1 1 27700
40 % 1 1 22921
30 % 4 7 5932

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures