Sequence Similarity Clusters for the Entities in PDB 4QA7

Entity #1 | Chains: A
Histone deacetylase 8 protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62740
95 % 33 47 623 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 33 47 651
70 % 33 47 687
50 % 33 47 724
40 % 33 47 752
30 % 33 47 792
Entity #2 | Chains: B
tetrapeptide substrate protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures