Sequence Similarity Clusters for the Entities in PDB 4Q6V

Entity #1 | Chains: A
Penicillin-binding protein activator LpoB protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42431
95 % 1 2 40921 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 3 21724
70 % 1 3 21407
50 % 1 3 18916
40 % 1 3 17368
30 % 1 3 15625

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures